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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs71199573 chr8:3269206 GTA/G CSMD1 chr8:2792875-4852494:- -0.43 -7.84 2.86E-14 Box Plot
THCA rs71200883 chr22:23964852 TTTTCATAGAGACCATTTAA IGLL3 chr22:25713888-25716191:+ 0.66 11.53 2.55E-27 Box Plot
THCA rs7120136 chr11:49384358 A/C FOLH1B chr11:89372395-89431886:+ -0.34 -6.07 2.59E-9 Box Plot
THCA rs71203373 chr8:11027491 T/TAA SGK223 chr8:8175258-8244008:- 0.47 9.08 2.97E-18 Box Plot
THCA rs71206067 chr6:26903379 C/T RNF5P1 chr8:38458179-38458718:- 0.77 6.51 1.95E-10 Box Plot
THCA rs71206067 chr6:26903379 C/T ZFP57 chr6:29640169-29648887:- 0.88 7.92 1.63E-14 Box Plot
THCA rs7122968 chr11:77447054 T/G INTS4L1 chr7:64601603-64694600:+ 0.61 9.86 5.33E-21 Box Plot
THCA rs7123080 chr11:77499387 C/T INTS4L1 chr7:64601603-64694600:+ 0.62 10.03 1.33E-21 Box Plot
THCA rs712327 chr14:37239005 A/T UBE2I chr16:1358881-1377019:+ -0.2 -5.92 6.18E-9 Box Plot
THCA rs7124542 chr11:49024102 G/A FOLH1B chr11:89372395-89431886:+ 0.46 6.61 1.06E-10 Box Plot
THCA rs7129116 chr11:49444426 A/C FOLH1B chr11:89372395-89431886:+ 0.42 7.04 6.87E-12 Box Plot
THCA rs7129556 chr11:77300048 A/G INTS4L1 chr7:64601603-64694600:+ -0.53 -8.02 8.41E-15 Box Plot
THCA rs71299773 chr5:176684818 T/TTTTTA LOC388955 chr2:63849182-63850159:- 0.79 20.5 1.79E-67 Box Plot
THCA rs7130664 chr11:29931003 A/G RASL12 chr15:65345675-65369028:- 0.2 6.31 6.56E-10 Box Plot
THCA rs7131239 chr11:49680463 A/G FOLH1B chr11:89372395-89431886:+ -0.33 -6.05 3.01E-9 Box Plot